Why did nature decide to create our genetic code with only
four letters? Dr. Steven Benner at
the Foundation for Applied Molecular Evolution in Florida has been researching
this question for nearly 30 years.
Over this time Benner has spent his time theorizing and attempting to
synthesize DNA and RNA with more than four nucleotides to increase its
capabilities. Recently his
research team has successfully synthesized two synthetic nucleotides that they
have deemed “P” and “Z”. These
nucleotides have the unique ability to fit into DNA’s helical sequence
seamlessly allowing a glimpse into the possibilities of a six letter genetic
alphabet. (1)
Benner’s six-nucleotide alphabet has shown tremendous upside
in the realm of genetics. Normally our bodies only have the ability to
synthesize 20 amino acids using the standard nucleotides ATCG. Using a six-letter alphabet, it would
be theoretically possibly to now synthesize up to 216 amino acids, which would
allow the creation of unprecedented genes and functions throughout an
organism. Benner also continues to
state that with continued engineering,, he believes a six nucleotide alphabet
could even one day allow the RNA of a genome to function at a high enough level
to eliminate the need for proteins as we know it.
There is no question that many more years of research are
needed to adequately study Banner’s accomplishments and their future
implications in genetics. However,
the infant stages of his novel research have already begun to shed light on the
vast possibilities that an enhanced genome may possess. Also, Banner doesn’t intend on
accepting satisfaction from achieving his initial 6-nucleotide goal. He has greater plans to work on
the synthesis of a 10 or even 12 letter alphabet that would truly turn the
world of genetics as we know it upside down. Although Benner's plan sounds terrific on the surface, what are some potential hurdles or problems that this new science may encounter?
Citations
Article originally viewed on “FlipBoard” and Quanta Magazine
https://www.quantamagazine.org/20150710-genetic-alphabet/
1.
Georgiadis MM, Singh I, Kellett WF, Hoshika S, Benner SA, Richards NG. Structural basis for a six nucleotide genetic
alphabet. J Am Chem Soc. 2015 Jun 3;137(21):6947-55. doi:
10.1021/jacs.5b03482. Epub 2015 May 18. PubMed PMID: 25961938.
My concern with coming out with 6 nucleotides instead of 4 would be where do you start? Sure you have come up with another base pair that could potentially fit in the double helical structure of DNA, but how would you incorporate it into an organism, or how would you create some organism with 6 nucleotides in it? And if you found some way to incorporate it into an organism in some way, how would you control what phenotype it exhibits? And just coming up with the new nucleotides, you would also need to come up with new RNA and DNA polymerases, new tRNA, new everything. This just seems quite impractical and a lot of work to do something that could potentially be harmful. It's definitely very interesting that new nucleotides can be synthesized, but I'm not sure what we would actually be able to do with it.
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